=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
===> Building for minimap2-2.24
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  main.c -o main.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  kthread.c -o kthread.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  kalloc.c -o kalloc.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  misc.c -o misc.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  bseq.c -o bseq.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  sketch.c -o sketch.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  sdust.c -o sdust.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  options.c -o options.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  index.c -o index.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  lchain.c -o lchain.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  align.c -o align.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  hit.c -o hit.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  seed.c -o seed.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  map.c -o map.o
map.c: In function 'mm_map_frag':
map.c:370:39: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
    fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
                                     ~~^                                            ~~~~~~~~~~~~~
                                     %d
map.c:370:49: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
    fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
                                               ~~^                                                 ~~~~~~~~~~~~
                                               %d
map.c:370:61: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t {aka unsigned int}' [-Wformat=]
    fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
                                                           ~~^                                                   ~~~~~~~~~~~~
                                                           %d
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  format.c -o format.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  pe.c -o pe.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  esterr.c -o esterr.o
gcc -c -g -Wall -O2 -Wc++-compat  -DHAVE_KALLOC  splitidx.c -o splitidx.o
gcc -c -g -Wall -O2 -Wc++-compat  -msse2 -DHAVE_KALLOC  ksw2_ll_sse.c -o ksw2_ll_sse.o
gcc: error: unrecognized command line option '-msse2'; did you mean '-misel'?
gmake: *** [Makefile:63: ksw2_ll_sse.o] Error 1
*** Error code 2

Stop.
make[1]: stopped in /usr/pkgsrc/biology/minimap2
*** Error code 1

Stop.
make: stopped in /usr/pkgsrc/biology/minimap2