=> Bootstrap dependency digest>=20211023: found digest-20211023 => Checksum BLAKE2s OK for R/RcppArmadillo_0.9.600.4.0.tar.gz => Checksum SHA512 OK for R/RcppArmadillo_0.9.600.4.0.tar.gz ===> Installing dependencies for R-RcppArmadillo-0.9.600.4.0 ========================================================================== The following variables will affect the build process of this package, R-RcppArmadillo-0.9.600.4.0. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp Based on these variables, the following variables have been set: * BLAS_INCLUDES (not defined) * BLAS_LIBS = -lblas * BLAS_TYPE = netlib * CBLAS_LIBS = -lcblas -lblas * LAPACKE_LIBS = -llapacke -llapack -lblas * LAPACK_LIBS = -llapack -lblas You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency checkperms>=1.1: found checkperms-1.12 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency R>=4.0.3nb1: found R-4.1.2nb1 => Full dependency R-Rcpp>=1.0.2: found R-Rcpp-1.0.7 => Full dependency gcc7>=7.0: found gcc7-7.5.0nb5 ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. ===> Overriding tools for R-RcppArmadillo-0.9.600.4.0 ===> Extracting for R-RcppArmadillo-0.9.600.4.0 ===> Patching for R-RcppArmadillo-0.9.600.4.0 => Applying pkgsrc patches for R-RcppArmadillo-0.9.600.4.0 => Verifying /usr/pkgsrc/math/R-RcppArmadillo/patches/patch-configure => Applying pkgsrc patch /usr/pkgsrc/math/R-RcppArmadillo/patches/patch-configure Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-configure,v 1.2 2019/07/31 18:39:24 brook Exp $ | |Portability fix. | |--- configure.orig 2019-07-15 02:31:39.000000000 +0000 |+++ configure -------------------------- Patching file configure using Plan A... Hunk #1 succeeded at 2732. Hunk #2 succeeded at 2740. Hunk #3 succeeded at 2753. Hunk #4 succeeded at 2795. Hunk #5 succeeded at 2815. done ===> Creating toolchain wrappers for R-RcppArmadillo-0.9.600.4.0 ===> Configuring for R-RcppArmadillo-0.9.600.4.0 => Checking for portability problems in extracted files